BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038G01SP1|AL430586
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig656 676 0.0
>3x_Contig656
Length = 1941
Score = 676 bits (341), Expect = 0.0
Identities = 341/341 (100%)
Strand = Plus / Minus
Query: 559 tctttttgacctgctgaaactaattcccttggttatactctcataatcacttctacgttc 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1941 tctttttgacctgctgaaactaattcccttggttatactctcataatcacttctacgttc 1882
Query: 619 ctctacattattcacgccagcagataaatgagcattgatgaagcagaaagatgtacttcc 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1881 ctctacattattcacgccagcagataaatgagcattgatgaagcagaaagatgtacttcc 1822
Query: 679 atagtcgaatctaatggcaacagcacctttgttaccggtcattcctcctagacctgtttt 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1821 atagtcgaatctaatggcaacagcacctttgttaccggtcattcctcctagacctgtttt 1762
Query: 739 ctttgaagaaccctctactctttttacatttccaactttgtcagctttgacaaagaataa 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1761 ctttgaagaaccctctactctttttacatttccaactttgtcagctttgacaaagaataa 1702
Query: 799 tataatcaaagatgacatttgctcggctctcaacatgatataattttcatgtttgttcaa 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1701 tataatcaaagatgacatttgctcggctctcaacatgatataattttcatgtttgttcaa 1642
Query: 859 gcaactatgaactaagtctttccaaaattgtgactttgaag 899
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 1641 gcaactatgaactaagtctttccaaaattgtgactttgaag 1601
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7132
Number of Sequences: 1807
Number of extensions: 7132
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)